Scientists Control CRISPR With Light

Engineers show that near-infrared light can trigger the release of CRISPR-Cas9 to slow tumor growth

2 min read
The upconversion nanoparticles convert near-infrared light into ultraviolet light, inducing the cleavage of linker and triggering the on-demand release of Cas9 with subsequent gene edting.
Illustration: Yujun Song/Nanjing University

Engineers are making their mark on biotech’s hottest commodity. Chinese scientists today reported that they can control the gene editing tool CRISPR-Cas9 with light.

The method replaces the use of viruses traditionally used to deliver CRISPR gene editing machinery, and gives scientists temporal control over the tool, the researchers said. They published their findings in the journal Science Advances.

The technique has the potential to precisely target and kill cancer cells, says Yujun Song, an author of the paper and a professor in the College of Engineering and Applied Sciences at Nanjing University in China. 

CRISPR—short for Clustered, Regularly Interspaced, Short Palindromic Repeats, is a genetic phenomenon found in microbes that scientists have turned into a DNA chopping machine. When combined with certain proteins, typically one called Cas9, the biological complex can cut and paste DNA, altering life’s genetic code. 

Physically delivering CRISPR-Cas9 into a cell typically requires hitching the complex to a virus. The virus invades the nucleus of the target cell, delivering the CRISPR cut-and-paste machinery. The strategy works, but using viruses as a delivery method can cause problems, such as provoking cancer or an immune response.

Researchers have proposed several alternative delivery materials, including gold nanoparticles, black phosphorus, metal-organic frameworks, graphene oxide, and various nanomaterials. These methods avoid some of the pitfalls of viruses, but still don’t give scientists control over the timing of gene editing.

That’s where light comes in. The authors of the new report anchored CRISPR-Cas9 to light-converting nanoparticles using a light-sensitive chemical compound. Then, by exposing the particles to light, the scientists triggered the release of the CRISPR-Cas9 machinery from the nanoparticles, delivering them to cells on demand

The system is smart not only because the timing of the release of CRISPR-Cas9 can be controlled, but also because it can be delivered fairly deep into the body, and controlled remotely.

Key to remote control of the system is the use of light-converting nanoparticles, called upconversion nanoparticles, as the delivery material. These nanoparticles absorb and convert low-energy near-infrared (NIR) radiation to visible, ultraviolet (UV) light, and have been used lately in other biomedical applications.  

Both types of light are needed to get the job done. NIR light penetrates human tissue to reach the nanoparticles deep in the body (something UV light can’t do). And UV light has the ability to cut the light-sensitive molecules, untethering CRISPR-Cas9. 

The authors tested their system on mice with tumors. They loaded the CRISPR-Cas9 complex with a genetic code that stops the production of a protein associated with cancer cells. Then they anchored the CRISPR-Cas9 complex to the upconversion nanoparticles and injected them at the sites of the tumors in the mice. 

Next, they shined NIR light from outside the mouse body toward the target, triggering the nanoparticles to convert it and emit UV light. The UV light breaks up the light-sensitive compound, and releases the CRISPR-Cas9 complex to do its job. Tumor growth in the mice slowed, the authors reported. 

The researchers hope to apply the tool not only to cancer, but also Parkinson’s disease and diabetes, says Song. “Our group is focused on nanomedicine and we are going to develop the tool for disease treatment in the human body,” he says. Other lead collaborators on the paper include Youhui Lin at the Research Institute for Biomimetics and Soft Matter at Xiamen University, and Yuzhen Wang at the Key Laboratory of Flexible Electronics and Institute of Advanced Materials at Nanjing Tech University. 

The Conversation (0)

This CAD Program Can Design New Organisms

Genetic engineers have a powerful new tool to write and edit DNA code

11 min read
A photo showing machinery in a lab

Foundries such as the Edinburgh Genome Foundry assemble fragments of synthetic DNA and send them to labs for testing in cells.

Edinburgh Genome Foundry, University of Edinburgh

In the next decade, medical science may finally advance cures for some of the most complex diseases that plague humanity. Many diseases are caused by mutations in the human genome, which can either be inherited from our parents (such as in cystic fibrosis), or acquired during life, such as most types of cancer. For some of these conditions, medical researchers have identified the exact mutations that lead to disease; but in many more, they're still seeking answers. And without understanding the cause of a problem, it's pretty tough to find a cure.

We believe that a key enabling technology in this quest is a computer-aided design (CAD) program for genome editing, which our organization is launching this week at the Genome Project-write (GP-write) conference.

With this CAD program, medical researchers will be able to quickly design hundreds of different genomes with any combination of mutations and send the genetic code to a company that manufactures strings of DNA. Those fragments of synthesized DNA can then be sent to a foundry for assembly, and finally to a lab where the designed genomes can be tested in cells. Based on how the cells grow, researchers can use the CAD program to iterate with a new batch of redesigned genomes, sharing data for collaborative efforts. Enabling fast redesign of thousands of variants can only be achieved through automation; at that scale, researchers just might identify the combinations of mutations that are causing genetic diseases. This is the first critical R&D step toward finding cures.

Keep Reading ↓ Show less